· 12 min read

Sync Inventory between Two Shopify Stores (Manually&via App)

Nazlıcan Berk
-Published on:
Jan 16, 2024
-Updated on:
Jan 13, 2026

Having multiple Shopify stores is good, but trying to deal with their inventories separately could be challenging. That's why it's better to find out how to sync inventory between two (or more) Shopify stores for better inventory management.

If you have more than one Shopify store and want to ensure all your products are in sync with each other, you've come to the right place.

In this blog post, we will explain how to sync inventory between two Shopify stores, why you should have multiple Shopify stores, and some tools you may use for better inventory management. Let's begin.

How to Manually Sync Inventory between Two Shopify Stores?

It is possible to export CSV files from your Shopify store to create a duplicate of your store.

To duplicate your Shopify store manually, you can export the following CVS files:

  • products
  • orders
  • gift card and discount codes
  • financial data
  • customers

You can transfer some store information using these files when you duplicate a store. But remember, other types of information must be entered manually in your Shopify admin.

There are also some limitations to transferring store information. For example, orders cannot be imported into a store through the Shopify admin. Still, you can do this through the Shopify API.

That's why you need to be aware that syncing inventory between two Shopify stores may require some technical knowledge. You'll need to use the API (application programming interface) or write some code yourself — two skills not everyone has.

So if you're not comfortable with this, don't worry too much, as there are plenty of other options available (which we'll get into below). You can also hire a Shopify expert to import orders into your new store, as Shopify does not support this.

shopify stock photo showing a white phone with Shopify website open on the secreen on a notebook titled top 5 business ideas on it

Now let's see the steps to follow to duplicate your Shopify store to have a sync inventory:

Step 1: Make sure you log in to both stores as the store owner, and they are on the same plan.

Step 2: Choose the same theme and export product CSV files.

Step 3: Prepare your product media for export.

Step 4: Import the CSV files for your products' "Products" page in the Shopify admin.

These steps will help you manually have the same inventory in both stores.

There is another way to make this easier for you, which is using an app for it. So now, let's see some of the apps to sync inventory between multiple Shopify stores.

Apps to Use to Sync Inventory between Two Shopify Stores

If the process of syncing inventory between multiple Shopify stores overwhelms you, having a little help from apps does not hurt. That's why we picked some apps for you to choose the right fit for your business.

1. Multi‑Store Sync Power by EGNITION

Multi-Store Sync Power assists you in automatically synchronizing inventory across multiple stores.

multistore sync power homepage screenshot with the head title MULTI-STORE SYNC POWER on a dark blue background and a video trailer is available below

Features:

  • Automated inventory updates in linked stores when there is a new order, refund, or cancellation.
  • Automated synchronization of fields and images in all stores when you create and update products once.
  • Sync inventory on a location level rather than store level.
  • Locate any unrelated products in your stores and see if any SKUs/Barcodes are incorrectly configured or if the synchronization process was skipped.

Cons:

  • Some user reviews show that if not treated right, the app might put items out of stock, set the products offline, and delete inventory on their own.
  • If your store has high traffic, you may experience app downtime.

Pricing:

There is a 7-day free trial available. The free plan allows you to have 0-25 products (per connected store). The basic plan is $5.99/month for stores with 26-100 products (per connected store).

Overall Shopify Rating: 4.4⭐️

2. Katana Manufacturing ERP by Katana Manufacturing ERP

Katana Manufacturing ERP helps you manage your inventory, sync stock, and schedule production.

katana homepage screenshot with "everything you need to keep manufacturing" title on the left and a demo video window on the right

Features:

  • Stock control with live inventory data.
  • Inventory and stock sync between multiple Shopify stores.
  • Update manufacturing orders based on changes to sales orders in Shopify.
  • Raw materials and product allocation for efficient sales order fulfillment.

Cons:

  • Could have better reports for snapshots of workflow.
  • At first, you might need help to accurately use the app.

Pricing:

There is a 14-day free trial. The essential plan starts at $99/month.

Overall Shopify Rating: 4.9⭐️

3. Syncio Multi Store Sync by Syncio

Syncio Multi Store Sync provides you with real-time inventory syncs, product attributes, and orders across multiple Shopify stores.

syncio homepage screenshot with "expand your reach by syncing inventory across Shopify stores" title and an app screenshot on the right, below there are brands like nine west, vogue, gap, etc.

Features:

  • Real-time inventory sync and adjustment using SKU or barcode.
  • Sync and customize product descriptions, prices, tags, images, etc.
  • Automated sync order information to source stores for fulfillment.
  • Possible to connect to an unlimited number of Shopify stores.

Cons:

  • You might experience some bugs.
  • The basic plan might be pricey for small businesses.

Pricing:

There is a 14-day free trial available. The starter plan starts at $19/month, and note that order sync and product setting modules charge separately.

This plan allows you to import up to 100 products, sync inventory in real time, and connect to unlimited source stores.

Overall Shopify Rating: 4.7⭐️

4. LitCommerce Multichannel Sync by LitCommerce

LitCommerce Multichannel Sync provides easy marketplace integration. Plus, you can sync inventory between not only Shopify stores but also different e-commerce platforms using this app.

litcommerce homepage with "sell everywhere never been easier" headline on the left and a store illustration on the right with different e-commerce platforms framing it

Features:

  • Real time inventory and price sync between stores.
  • Single-listing and multi-listing feature.
  • Inventory update as soon as the transactions are made.

Cons:

Needs improvement overall.

Pricing:

There is a forever free plan available with up to 20 listings, unlimited listing channels, chat/email support. The basic plan starts at $29/month or $24.92/month billed at $299 once per year. The basic plan includes up to 500 listings, price and inventory sync, VIP chat/email support.

Overall Shopify Rating: 4.6⭐️

Why Have More than One Shopify Store?

Let's cover some of the reasons to create multiple Shopify stores for your business.

Create Niche Stores

One of the benefits of creating multiple Shopify stores is being able to have separate niche stores.

For example, if you sell dog food and cat food, you're going to need two entirely different types of packaging—one for dogs and one for cats—and two different kinds of shipping options.

Plus, your marketing strategies will also need to be completely different for each product line.

store written neon lights on a dark background at dark

But instead of selling dog food and cat food from the same store, you can create separate stores for each. This way, you sell dog-related stuff like clothes, toys, and food from one store and cat-related things from another store.

You can use the same packaging for both products in this case as there won't be any misunderstandings, as well as the same shipping options and marketing strategies.

The same goes with an accessories store, too. If you are selling sunglasses, scarves, jewelry, and similar stuff, you can as well create another Shopify store for your jewelry line solely to help it grow on its own.

Reach a Bigger Audience

If you're a Shopify store owner, you've probably thought about expanding your business to an international market. It's a great idea!

However, when people from different cultures shop online, they have very different expectations about how things should work—and if your site doesn't match those expectations, then customers may leave without even making a purchase.

So, how do you ensure that your brand is recognizable and consistent in each country? How do you keep track of what's selling well and where? How do you even know how to approach the different markets?

audience stock photo showing a hand drawing arrows pointing at the "audience" word written on a whiteboard

The good news is that there are ways to make this process easier, including creating multiple Shopify stores.

Creating multiple Shopify stores for different countries can help you avoid some of the common pitfalls of doing business internationally.

For example, suppose your company has different target audiences in different countries or languages. In that case, it might be better for each store to use languages that are native to their customers.

You could also set up each store with its own payment gateway account so that your customers don't have trouble paying for products.

By creating multiple Shopify stores, you'll also be able to keep track of which products are selling well and where and adjust prices accordingly, which can help with figuring out what kinds of products should be offered in each country.

Appeal to Different Budgets and Customer Segments

One of the biggest challenges for retailers today is staying relevant in an increasingly crowded marketplace.

We're all competing for attention and sales with thousands of other sellers, and it can feel like a struggle to get your product in front of the right customer at the right time.

One solution? Create multiple Shopify stores!

business strategy stock photo showing hands of three people some have pens showing each other somethings on a table with paper, stick notes and a laptop

Why do this? Because it allows you to:

  • Reach more customers who are interested in a specific product or price point.
  • Appeal to customers who want something different than what they've seen before.
  • Get more sales with less work because you're reaching more potential customers who are already interested in what you offer.

For example, if you have a ton of customers who are looking for high-quality products but don't want to pay a fortune for them, you could create a store for them where all products are under $100.

Suppose you have another group of customers who would be willing to spend more money on their purchases because they know it will last longer and be more durable.

In that case, you could create another store that sells high-end items priced at $150 or more.

This way, you can appeal to two different groups of customers without having to sacrifice any potential sales by separating them into two different stores.

Test Your Campaigns

Promotional campaigns are pricey, and we need other ways to test our campaigns before making money rain. Having two or more Shopify stores come to the stage at this point.

Instead of launching the campaigns on your main website directly, you can create a separate Shopify store where you can try their effect in the first place to make sure you have the right campaign for your store.

Before You Leave…

If you have multiple Shopify stores, using sync inventory between your stores might be time-saving. Syncing inventories in one place makes managing your stores much easier.

We have covered two different ways to do this: Manually duplicating your store and using third-party apps for it. You can choose the one that suits your business better in light of the detailed information below.

Do you have multiple Shopify stores? How do you sync inventory between two Shopify stores?

Meet me in the comments section below!

Frequently Asked Questions

1. Can I have Multiple Shopify Stores with the Same Email Address?

The short answer is "Yes." You can have multiple Shopify stores with the same email address, and after you log in to your Shopify admin, you can navigate between them.

2. Is it Challenging to Have Multiple Shopify Stores?

Having multiple stores on Shopify has its own challenges, like SEO issues, different time zones, different customer needs, and tracking inventory (if you don't sync inventories).

3. Why should I Sync my Shopify Stores?

Manually updating inventory in multiple stores is more than one can handle. Plus, syncing the inventories of all your Shopify stores will make managing sales easier as you'll be in control of all stock information.

4. What are Some Tips to Manage Multiple Shopify Stores?

Some fundamental tips to manage multiple Shopify stores efficiently include:

  • Making sure to optimize each site.
  • Sync inventory and centralized order management.
  • Analyzing business data regularly.

Check These Out!

Frequently Asked Questions

Can two Shopify stores share inventory?

Two Shopify stores can share inventory, but Shopify doesn’t natively “pool” stock across separate stores the way it does across locations inside one store—so you’ll need a process to keep quantities aligned. Manually, you can duplicate product data by exporting/importing product CSVs so both stores carry the same SKUs, then update inventory levels in both places whenever a sale happens (which is workable for small catalogs but becomes error-prone as orders increase). For real shared inventory, most businesses use an inventory sync app that connects two (or more) Shopify stores and automatically updates stock when an item sells in any connected store, usually matching products by SKU and syncing available quantities to prevent overselling. The key to success is consistent SKUs, a clear “source of truth” for inventory (which store or system owns the stock numbers), and careful handling of variants, bundles, and multi-location stock so the sync reflects what you can actually fulfill.

How do I link two Shopify stores?

Linking two Shopify stores typically means connecting them through an app or integration rather than “merging” them inside Shopify, since each Shopify store is its own separate admin, checkout, and database. The most common approach is to install a multi-store sync app (for inventory, products, or orders) in both stores, then authenticate each store and choose what you want to sync—such as inventory quantities, product details, pricing, or collections—often using SKU matching to map items between stores. If your goal is marketing/analytics linking (for example, Braze or similar platforms), you generally install the integration app in your first store, then use the app’s dashboard to “Connect New Store,” authorize the second store, and confirm which data streams (customers, events, catalog) should be shared. If you need a deeper custom link (like syncing orders or complex workflows), you can connect both stores via the Shopify API using private/custom apps and webhooks, but that requires technical setup and ongoing maintenance.

How to transfer data from one Shopify store to another?

To transfer data from one Shopify store to another, you usually export what Shopify allows from the source store, prepare the files, and import them into the destination store, then manually recreate anything that can’t be imported directly. A typical workflow is: export products to CSV (including variants and SKUs), download or reattach product media (since images/files may not always carry over cleanly), then import the product CSV into the new store from the Products area. You can also export customers to CSV and import them, and recreate discount codes and gift cards (often requiring manual steps or apps depending on the data). Note that Shopify doesn’t let you import orders through the admin, so moving order history usually requires the Shopify API, a third-party migration tool, or hiring a Shopify expert; similarly, things like theme customizations, navigation, pages, apps, and settings often need to be rebuilt or reconfigured. After import, always audit key fields—SKUs, inventory tracking, variant options, prices, and shipping weights—because small formatting issues in CSVs can cause mismatched variants or incorrect stock.

How to move Shopify inventory between locations?

To move Shopify inventory between locations (within the same Shopify store), you use Shopify’s inventory transfer feature to record stock moving from one location (like a warehouse) to another (like a retail store). In your Shopify admin, go to Products > Transfers, click Create transfer, choose the origin location and destination location, add the products/variants and quantities you’re moving, and then mark the transfer as shipped/received as the stock physically moves; once received, Shopify updates the available quantities at the destination location (and reduces it at the origin, depending on how the transfer is processed). This is useful for maintaining accurate stock by location, planning replenishment, and creating a clear paper trail for internal operations. If you’re moving inventory between two separate Shopify stores (not locations), that’s a different scenario—you’d typically rely on a multi-store sync app or manual updates, because Shopify’s transfer tool only works across locations inside one store.

What is Multi store Sync Power?

Multi Store Sync Power is commonly used to refer to an inventory and product synchronization solution (often an app) that helps merchants keep multiple Shopify stores aligned in real time. In practice, it’s designed for businesses running more than one storefront—such as separate stores for regions, currencies, B2B vs. B2C, or different brands—where the same products are sold across stores and stock needs to stay consistent. These tools typically sync inventory quantities using SKUs, and may also sync product details like titles, descriptions, images, prices, and variants, depending on configuration. The “power” aspect usually implies automation and rules—such as selecting a master store as the source of truth, choosing which fields to sync, preventing overselling by updating stock immediately after a sale, and optionally handling multi-location inventory logic—so you spend less time exporting/importing CSVs and more time running the business.

What is Syncio?

Syncio is a Shopify app focused on syncing products and inventory between multiple Shopify stores so merchants can sell the same catalog across different storefronts without manually duplicating and updating stock. It’s often used for multi-store setups (for example, separate stores for different countries or wholesale/retail) and for supplier–retailer relationships where a supplier’s inventory needs to be reflected in a retailer’s store. Typically, Syncio connects stores, maps products (commonly by SKU), and then keeps inventory quantities updated automatically when sales occur, helping reduce overselling and manual stock adjustments. Depending on how it’s configured, it can also help with product publishing and maintaining consistent product data across stores, though the exact capabilities can vary by plan and setup.

What is Syncio Shopify?

Syncio Shopify generally refers to using the Syncio app within the Shopify ecosystem to connect two or more Shopify stores and automate product and inventory synchronization between them. In a straightforward multi-store scenario, you install Syncio on each store, authorize the connection, match products (usually via SKU), and select what to sync—most importantly inventory levels—so when an item sells in Store A, the available quantity updates in Store B (and any other connected stores) to keep stock accurate. It’s especially helpful when Shopify’s built-in tools fall short for cross-store inventory sharing, because Shopify treats each store as separate; Syncio acts as the bridge that keeps catalogs and quantities aligned. For best results, merchants ensure SKUs are consistent, confirm variant mappings, and define which store or system is the inventory “owner,” so the sync reflects real fulfillable stock and avoids conflicts when multiple stores can change quantities.